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vps25 ESCRT II complex subunit Vps25 [ Schizosaccharomyces osmophilus ]

Gene ID: 80873603, updated on 6-Jun-2024

Summary

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Gene symbol
vps25
Gene description
ESCRT II complex subunit Vps25
Locus tag
SOMG_00116
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces osmophilus (strain: CBS 15793, culture-collection: CBS:15793, type-material: holotype of Schizosaccharomyces osmophilus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See vps25 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_079238.1 (261978..262631)

Chromosome 1 - NC_079238.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor eIF2A Neighboring gene Sm snRNP core protein Smg1 Neighboring gene U1 snRNP-associated protein Usp102 Neighboring gene plasma membrane glucose/fructose:proton symporter Ght2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079238.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A high-quality reference genome for the fission yeast Schizosaccharomyces osmophilus. Jia GS, et al. G3 (Bethesda), 2023 Apr 11. PMID 36748990, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ESCRT II complex subunit Vps25

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_079238.1 Reference assembly

    Range
    261978..262631
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056178914.1 → XP_056036888.1  ESCRT II complex subunit Vps25 [Schizosaccharomyces osmophilus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAE9WAK0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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