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LOC8082723 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 [ Sorghum bicolor (sorghum) ]

Gene ID: 8082723, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8082723
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11
Locus tag
SORBI_3004G325900
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8082723 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 4 NC_012873.2 (66111370..66115446)

Chromosome 4 - NC_012873.2Genomic Context describing neighboring genes Neighboring gene serine/arginine-rich splicing factor RSZ21A Neighboring gene protein CYPRO4 Neighboring gene RING-H2 finger protein ATL13 Neighboring gene probable leucine-rich repeat receptor-like protein kinase IMK3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012873.2 Chromosome 4 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012873.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    66111370..66115446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002452914.2 → XP_002452959.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11

    See identical proteins and their annotated locations for XP_002452959.1

    UniProtKB/TrEMBL
    A0A921R725, C5XUC4
    Conserved Domains (1) summary
    PLN02205
    Location:1 → 833
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Nucleotide Protein
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