U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC8080953 probable cellulose synthase A catalytic subunit 1 [UDP-forming] [ Sorghum bicolor (sorghum) ]

Gene ID: 8080953, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC8080953
Gene description
probable cellulose synthase A catalytic subunit 1 [UDP-forming]
Locus tag
SORBI_3009G063400
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC8080953 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 9 NC_012878.2 (6745377..6751794, complement)

Chromosome 9 - NC_012878.2Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At2g34160 Neighboring gene uncharacterized LOC8072708 Neighboring gene uncharacterized LOC110430044 Neighboring gene wall-associated receptor kinase 3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_012878.2 Chromosome 9 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable cellulose synthase A catalytic subunit 1 [UDP-forming]

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012878.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    6745377..6751794 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002440649.2 → XP_002440694.1  probable cellulose synthase A catalytic subunit 1 [UDP-forming]

    See identical proteins and their annotated locations for XP_002440694.1

    UniProtKB/TrEMBL
    A0A921U3S3, C5Z153
    Conserved Domains (3) summary
    PLN02400
    Location:1 → 1073
    PLN02400; cellulose synthase
    pfam14569
    Location:34 → 99
    zf-UDP; Zinc-binding RING-finger
    cl11394
    Location:505 → 822
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials