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LOC8077684 mediator of RNA polymerase II transcription subunit 23 [ Sorghum bicolor (sorghum) ]

Gene ID: 8077684, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8077684
Gene description
mediator of RNA polymerase II transcription subunit 23
Locus tag
SORBI_3004G248600
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8077684 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
21
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 4 NC_012873.2 (59559735..59572633)

Chromosome 4 - NC_012873.2Genomic Context describing neighboring genes Neighboring gene APO protein 2, chloroplastic Neighboring gene GDSL esterase/lipase At5g37690 Neighboring gene protein ODORANT1 Neighboring gene ADP-ribosylation factor-like protein 8c

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012873.2 Chromosome 4 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012873.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    59559735..59572633
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002452555.2 → XP_002452600.1  mediator of RNA polymerase II transcription subunit 23

    See identical proteins and their annotated locations for XP_002452600.1

    UniProtKB/TrEMBL
    A0A921R802, A0A921R838, C5XZB6
    Conserved Domains (1) summary
    pfam11573
    Location:739 → 1549
    Med23; Mediator complex subunit 23
Nucleotide Protein
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