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LOC8072301 mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [ Sorghum bicolor (sorghum) ]

Gene ID: 8072301, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8072301
Gene description
mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1
Locus tag
SORBI_3006G207200
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8072301 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 6 NC_012875.2 (55691302..55697094, complement)

Chromosome 6 - NC_012875.2Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L7-3 Neighboring gene uncharacterized LOC8072300 Neighboring gene putative DNA ligase 4 Neighboring gene uncharacterized membrane protein At1g16860

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012875.2 Chromosome 6 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012875.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    55691302..55697094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002448439.2 → XP_002448484.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1

    See identical proteins and their annotated locations for XP_002448484.1

    UniProtKB/TrEMBL
    A0A921UEE5, C5YFJ2
    Conserved Domains (1) summary
    pfam01532
    Location:109 → 540
    Glyco_hydro_47; Glycosyl hydrolase family 47
Nucleotide Protein
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Molecular Biology Databases
Research Materials