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LOC8069225 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic [ Sorghum bicolor (sorghum) ]

Gene ID: 8069225, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8069225
Gene description
1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic
Locus tag
SORBI_3010G273800
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8069225 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 10 NC_012879.2 (60688826..60695024, complement)

Chromosome 10 - NC_012879.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110430868 Neighboring gene NAC domain-containing protein 67 Neighboring gene protein LAZ1 Neighboring gene cyclin-B2-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012879.2 Chromosome 10 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,4-alpha-glucan branching enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cation binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic
Names
Sb10g030776
putative starch branching enzyme I
seed starch branching enzyme
starch branching enzyme I

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012879.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    60688826..60695024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002439014.2 → XP_002439059.2  1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic

    UniProtKB/TrEMBL
    A0A921Q652, Q9M6P8
    Conserved Domains (1) summary
    PLN02447
    Location:24 → 774
    PLN02447; 1,4-alpha-glucan-branching enzyme
Nucleotide Protein
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