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LOC8063055 uncharacterized protein C18orf8 [ Sorghum bicolor (sorghum) ]

Gene ID: 8063055, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8063055
Gene description
uncharacterized protein C18orf8
Locus tag
SORBI_3001G255800
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8063055 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 1 NC_012870.2 (29431259..29441067, complement)

Chromosome 1 - NC_012870.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8063054 Neighboring gene uncharacterized LOC110430356 Neighboring gene skin secretory protein xP2-like Neighboring gene uncharacterized LOC110431795

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012870.2 Chromosome 1 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Mon1-Ccz1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein C18orf8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012870.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    29431259..29441067 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021447955.1 → XP_021303630.1  uncharacterized protein C18orf8

    UniProtKB/TrEMBL
    C5WMB4
    Conserved Domains (1) summary
    pfam07035
    Location:555 → 709
    Mic1; Colon cancer-associated protein Mic1-like

  2. XM_021447953.1 → XP_021303628.1  uncharacterized protein C18orf8

    UniProtKB/TrEMBL
    C5WMB4
    Conserved Domains (1) summary
    pfam07035
    Location:555 → 709
    Mic1; Colon cancer-associated protein Mic1-like

  3. XM_021447948.1 → XP_021303623.1  uncharacterized protein C18orf8

    UniProtKB/TrEMBL
    C5WMB4
    Conserved Domains (1) summary
    pfam07035
    Location:555 → 709
    Mic1; Colon cancer-associated protein Mic1-like

  4. XM_002467244.2 → XP_002467289.1  uncharacterized protein C18orf8

    See identical proteins and their annotated locations for XP_002467289.1

    UniProtKB/TrEMBL
    C5WMB4
    Conserved Domains (1) summary
    pfam07035
    Location:555 → 709
    Mic1; Colon cancer-associated protein Mic1-like
Nucleotide Protein
Heading Accession and Version

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