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LOC8055404 F-box protein GID2 [ Sorghum bicolor (sorghum) ]

Gene ID: 8055404, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8055404
Gene description
F-box protein GID2
Locus tag
SORBI_3004G192400
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8055404 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 4 NC_012873.2 (54436326..54440589)

Chromosome 4 - NC_012873.2Genomic Context describing neighboring genes Neighboring gene cell number regulator 2 Neighboring gene CTL-like protein DDB_G0274487 Neighboring gene uncharacterized LOC8070559 Neighboring gene non-specific lipid-transfer protein-like protein At5g64080

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012873.2 Chromosome 4 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012873.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    54436326..54440589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021460534.1 → XP_021316209.1  F-box protein GID2 isoform X2

    UniProtKB/TrEMBL
    A0A921R6T2

  2. XM_021460535.1 → XP_021316210.1  F-box protein GID2 isoform X2

    UniProtKB/TrEMBL
    A0A921R6T2

  3. XM_021460531.1 → XP_021316206.1  F-box protein GID2 isoform X1

    UniProtKB/TrEMBL
    A0A1Z5RPA8, A0A921R5D8

  4. XM_021460533.1 → XP_021316208.1  F-box protein GID2 isoform X1

    UniProtKB/TrEMBL
    A0A1Z5RPA8, A0A921R5D8

  5. XM_021460532.1 → XP_021316207.1  F-box protein GID2 isoform X1

    UniProtKB/TrEMBL
    A0A1Z5RPA8, A0A921R5D8
Nucleotide Protein
Heading Accession and Version

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