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LOC8054289 sulfoquinovosyl transferase SQD2 [ Sorghum bicolor (sorghum) ]

Gene ID: 8054289, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8054289
Gene description
sulfoquinovosyl transferase SQD2
Locus tag
SORBI_3001G427300
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8054289 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 1 NC_012870.2 (70649338..70654351, complement)

Chromosome 1 - NC_012870.2Genomic Context describing neighboring genes Neighboring gene peroxisomal nicotinamide adenine dinucleotide carrier Neighboring gene josephin-like protein Neighboring gene chromosome transmission fidelity protein 18 homolog Neighboring gene BTB/POZ domain-containing protein At3g09030

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012870.2 Chromosome 1 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012870.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    70649338..70654351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002468089.2 → XP_002468134.1  sulfoquinovosyl transferase SQD2

    See identical proteins and their annotated locations for XP_002468134.1

    UniProtKB/TrEMBL
    A0A921S7A3, C5WQ54
    Conserved Domains (1) summary
    PLN02871
    Location:1 → 414
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Nucleotide Protein
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Gene LinkOut

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Research Materials