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E4 1,3 galactose glycoprotein beta1, 6 N-acetyl glucosaminyl transferase 1 [ Elephant endotheliotropic herpesvirus 3A ]

Gene ID: 80541480, updated on 10-Oct-2024

Summary

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Gene symbol
E4
Gene description
1,3 galactose glycoprotein beta1, 6 N-acetyl glucosaminyl transferase 1
Locus tag
QKU20_gp008
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Elephant endotheliotropic herpesvirus 3A (isolate: Nyah NAP97, nat-host: Loxodonta africana)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; Proboscivirus
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Genomic context

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Sequence:
NC_077039.1 (12976..14562)

NC_077039.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor-6.3 Neighboring gene G protein-coupled receptor-6.4 Neighboring gene protein E4A Neighboring gene protein E4B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_077039.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Review of Elephant Endotheliotropic Herpesviruses and Acute Hemorrhagic Disease. Long SY, et al. ILAR J, 2016. PMID 26912715, Free PMC Article
  2. Complete Genome Sequence of Elephant Endotheliotropic Herpesvirus 1A. Ling PD, et al. Genome Announc, 2013 Apr 11. PMID 23580705, Free PMC Article
  3. Comparison of the Gene Coding Contents and Other Unusual Features of the GC-Rich and AT-Rich Branch Probosciviruses. Ling PD, et al. mSphere, 2016 May-Jun. PMID 27340696, Free PMC Article
  4. Complete Genome Sequence of Elephant Endotheliotropic Herpesvirus 4, the First Example of a GC-Rich Branch Proboscivirus. Ling PD, et al. mSphere, 2016 May-Jun. PMID 27340695, Free PMC Article
  5. Comparative genome analysis of four elephant endotheliotropic herpesviruses, EEHV3, EEHV4, EEHV5, and EEHV6, from cases of hemorrhagic disease or viremia. Zong JC, et al. J Virol, 2014 Dec. PMID 25231309, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
1,3 galactose glycoprotein beta1, 6 N-acetyl glucosaminyl transferase 1
YP_010802696.1
  • vGCNT1; 2x NXS/T; does not display any strain subtyping; novel captured host gene present in all EEHVs

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_077039.1 Reference assembly

    Range
    12976..14562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_010802696.1 1,3 galactose glycoprotein beta1, 6 N-acetyl glucosaminyl transferase 1 [Elephant endotheliotropic herpesvirus 3A]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A866VRV4
Nucleotide Protein
Heading Accession and Version

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