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RpL19 ribosomal protein L19 [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8042736, updated on 31-Jul-2024

Summary

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Gene symbol
RpL19
Gene description
ribosomal protein L19
See related
VectorBase:ISCP_034021; EnsemblRapid:LOC8042736
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
Orthologs
fruit fly all
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Genomic context

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See RpL19 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609882.1 (36331759..36335502, complement)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024388539.1 (963517..967266)

NW_024609882.1Genomic Context describing neighboring genes Neighboring gene glutamine amidotransferase-like class 1 domain-containing protein 1 Neighboring gene glycoprotein 3-alpha-L-fucosyltransferase A-like Neighboring gene ATP-dependent 6-phosphofructokinase Neighboring gene uncharacterized LOC8042735

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An annotated catalog of salivary gland transcripts from Ixodes scapularis ticks. Ribeiro JM, et al. Insect Biochem Mol Biol, 2006 Feb. PMID 16431279
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L19
Names
putative ribosomal protein l19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609882.1 Reference ASM1692078v2

    Range
    36331759..36335502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029981143.3 → XP_029837003.1  60S ribosomal protein L19

    UniProtKB/TrEMBL
    B7QKS6, Q4PM35
    Related
    XP_029837003.1, XM_029981143.3
    Conserved Domains (1) summary
    cd01417
    Location:4 → 165
    Ribosomal_L19e_E; Ribosomal protein L19e, eukaryotic. L19e is found in the large ribosomal subunit of eukaryotes and archaea. L19e is distinct from the ribosomal subunit L19, which is found in prokaryotes. It consists of two small globular domains connected by an ...
Nucleotide Protein
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