U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC8032221 cobalamin trafficking protein CblD [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8032221, updated on 31-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
LOC8032221
Gene description
cobalamin trafficking protein CblD
See related
VectorBase:ISCP_014946; EnsemblRapid:LOC8032221
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC8032221 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609880.1 (48428840..48448918)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024389227.1 (238956..260750, complement)

NW_024609880.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase HECW2 Neighboring gene Death-associated protein kinase related Neighboring gene UPF0565 protein C2orf69 homolog Neighboring gene hemocytin

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cobalamin trafficking protein CblD
Names
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609880.1 Reference ASM1692078v2

    Range
    48428840..48448918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029972393.3 → XP_029828253.1  cobalamin trafficking protein CblD

    UniProtKB/TrEMBL
    A0A4D5RB31
    Related
    XP_029828253.1, XM_029972393.3
    Conserved Domains (1) summary
    pfam10229
    Location:60 → 285
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_042294053.1 → XP_042149987.1  cobalamin trafficking protein CblD

    UniProtKB/TrEMBL
    A0A4D5RB31
    Related
    XP_042149987.1, XM_042294053.1
    Conserved Domains (1) summary
    pfam10229
    Location:60 → 285
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials