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LOC8031167 ankyrin repeat and KH domain-containing protein 1 [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8031167, updated on 31-Jul-2024

Summary

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Gene symbol
LOC8031167
Gene description
ankyrin repeat and KH domain-containing protein 1
See related
VectorBase:ISCP_013694; EnsemblRapid:LOC8031167
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
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Genomic context

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See LOC8031167 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609868.1 (126360636..126449565, complement)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024388135.1 (2198375..2287351, complement)

NW_024609868.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120842214 Neighboring gene mitochondrial calcium uniporter Neighboring gene cell division control protein 1 Neighboring gene eukaryotic translation initiation factor 4E binding protein thor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ankyrin repeat and KH domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609868.1 Reference ASM1692078v2

    Range
    126360636..126449565 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042292621.1 → XP_042148555.1  LOW QUALITY PROTEIN: ankyrin repeat and KH domain-containing protein 1

    Related
    XP_042148555.1, XM_042292621.1
    Conserved Domains (5) summary
    smart00322
    Location:1859 → 1922
    KH; K homology RNA-binding domain
    PHA03095
    Location:140 → 440
    PHA03095; ankyrin-like protein; Provisional
    COG0666
    Location:1107 → 1298
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:334 → 363
    ANK; ANK repeat [structural motif]
    cl39094
    Location:1191 → 1435
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials