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waw Translation factor waclaw [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8029985, updated on 31-Jul-2024

Summary

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Gene symbol
waw
Gene description
Translation factor waclaw
See related
VectorBase:ISCP_014060; EnsemblRapid:LOC8029985
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
Also known as
EF-4
Orthologs
fruit fly all
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Genomic context

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See waw in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609879.1 (125703421..125705920, complement)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024389409.1 (621262..624022, complement)

NW_024609879.1Genomic Context describing neighboring genes Neighboring gene retinal dehydrogenase 1 Neighboring gene aldehyde dehydrogenase, mitochondrial Neighboring gene Exocyst complex component Sec10 Neighboring gene protein inscuteable homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mitochondrial ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
translation factor GUF1 homolog, mitochondrial
Names
Elongation factor 4 homolog
GTPase GUF1 homolog
Ribosomal back-translocase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609879.1 Reference ASM1692078v2

    Range
    125703421..125705920 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002408396.5 → XP_002408440.3  translation factor GUF1 homolog, mitochondrial

    UniProtKB/Swiss-Prot
    B7PJS6
    Related
    XP_002408440.3, XM_002408396.5
    Conserved Domains (1) summary
    PRK05433
    Location:66 → 668
    PRK05433; GTP-binding protein LepA; Provisional
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials