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LOC8024160 mitochondrial substrate carrier family protein S [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8024160, updated on 31-Jul-2024

Summary

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Gene symbol
LOC8024160
Gene description
mitochondrial substrate carrier family protein S
See related
VectorBase:ISCP_020894; EnsemblRapid:LOC8024160
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
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Genomic context

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See LOC8024160 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609838.1 (3408700..3417051, complement)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024389346.1 (125255..133606, complement)

NW_024609838.1Genomic Context describing neighboring genes Neighboring gene transcription factor jun-D Neighboring gene gamma-secretase subunit Aph-1 Neighboring gene cell division cycle protein 14 Neighboring gene cyanocobalamin reductase / alkylcobalamin dealkylase Neighboring gene zinc finger protein 367 Neighboring gene plasminogen activator inhibitor 1 RNA-binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome of the female synganglion of the black-legged tick Ixodes scapularis (Acari: Ixodidae) with comparison between Illumina and 454 systems. Egekwu N, et al. PLoS One, 2014. PMID 25075967, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial ornithine transporter 1; mitochondrial substrate carrier family protein S

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609838.1 Reference ASM1692078v2

    Range
    3408700..3417051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002404523.4 → XP_002404567.3  mitochondrial substrate carrier family protein S isoform X1

    UniProtKB/TrEMBL
    B7P3Q8
    Related
    XP_002404567.3, XM_002404523.4
    Conserved Domains (1) summary
    PTZ00168
    Location:21 → 248
    PTZ00168; mitochondrial carrier protein; Provisional

  2. XM_040205673.3 → XP_040061607.1  mitochondrial ornithine transporter 1 isoform X2

    Related
    XP_040061607.1, XM_040205673.3
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials