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chst8 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 [ Danio rerio (zebrafish) ]

Gene ID: 796549, updated on 2-Nov-2024

Summary

Official Symbol
chst8provided by ZNC
Official Full Name
carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8provided by ZNC
Primary source
ZFIN:ZDB-GENE-090410-1
See related
AllianceGenome:ZFIN:ZDB-GENE-090410-1
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable sulfotransferase activity. Predicted to act upstream of or within carbohydrate biosynthetic process. Predicted to be located in Golgi membrane. Orthologous to human CHST8 (carbohydrate sulfotransferase 8). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See chst8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) Unplaced Scaffold NW_003335663.1 (10358..19637)
105 previous assembly GRCz10 (GCF_000002035.5) Unplaced Scaffold NW_003335663.1 (10380..18320)

NW_003335663.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
carbohydrate sulfotransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NW_003335663.1 Reference GRCz11 Primary Assembly

    Range
    10358..19637
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001336867.9XP_001336903.7  carbohydrate sulfotransferase 8

    UniProtKB/TrEMBL
    A0A8M9PVY1
    Conserved Domains (1) summary
    pfam03567
    Location:106335
    Sulfotransfer_2; Sulfotransferase family