U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

si:dkey-174n20.1 si:dkey-174n20.1 [ Danio rerio (zebrafish) ]

Gene ID: 796174, updated on 12-Sep-2024

Summary

Official Symbol
si:dkey-174n20.1provided by ZNC
Official Full Name
si:dkey-174n20.1provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-7890
See related
Ensembl:ENSDARG00000035579 AllianceGenome:ZFIN:ZDB-GENE-030131-7890
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fj39b10; wu:fj39b10
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See si:dkey-174n20.1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (20921840..20928198)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (20418034..20424398)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene si:ch211-225b11.4 Neighboring gene phosphoinositide-3-kinase interacting protein 1 Neighboring gene calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 Neighboring gene si:dkey-13n15.2

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein LOC796174

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001082916.2NP_001076385.2  uncharacterized protein LOC796174

    Status: VALIDATED

    Source sequence(s)
    BX511148
    UniProtKB/TrEMBL
    A0A8M2BCK6, A3KNN9
    Related
    ENSDARP00000121521.1, ENSDART00000131838.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    20921840..20928198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)