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fam222aa family with sequence similarity 222 member Aa [ Danio rerio (zebrafish) ]

Gene ID: 793922, updated on 12-Sep-2024

Summary

Official Symbol
fam222aaprovided by ZNC
Official Full Name
family with sequence similarity 222 member Aaprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050309-42
See related
Ensembl:ENSDARG00000090797 AllianceGenome:ZFIN:ZDB-GENE-050309-42
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fam222a; im:7143836; si:dkey-175c11.1
Summary
Is expressed in several structures, including margin; nervous system; neural tube; periderm; and tail bud. Orthologous to human FAM222A (family with sequence similarity 222 member A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See fam222aa in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (19657225..19754679)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (19153431..19250866)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene metabolism of cobalamin associated B Neighboring gene mevalonate kinase Neighboring gene transient receptor potential cation channel, subfamily V, member 4 Neighboring gene glycolipid transfer protein a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
protein FAM222A
Names
family with sequence similarity 222 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001126454.1NP_001119926.1  protein FAM222A

    See identical proteins and their annotated locations for NP_001119926.1

    Status: PROVISIONAL

    Source sequence(s)
    BX546480
    UniProtKB/TrEMBL
    A0A8M2BCF5, B0S6Q6
    Related
    ENSDARP00000121787.1, ENSDART00000131924.2
    Conserved Domains (1) summary
    pfam15258
    Location:37422
    FAM222A; Protein family of FAM222A

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    19657225..19754679
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068221316.1XP_068077417.1  protein FAM222A isoform X1

  2. XM_005165186.5XP_005165243.1  protein FAM222A isoform X1

    See identical proteins and their annotated locations for XP_005165243.1

    UniProtKB/TrEMBL
    A0A8M2BCF5, B0S6Q6
    Conserved Domains (1) summary
    pfam15258
    Location:37422
    FAM222A; Protein family of FAM222A
  3. XM_009301360.4XP_009299635.1  protein FAM222A isoform X1

    See identical proteins and their annotated locations for XP_009299635.1

    UniProtKB/TrEMBL
    A0A8M2BCF5, B0S6Q6
    Conserved Domains (1) summary
    pfam15258
    Location:37422
    FAM222A; Protein family of FAM222A