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Fstl1 follistatin-like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 79210, updated on 18-Sep-2024

Summary

Official Symbol
Fstl1provided by RGD
Official Full Name
follistatin-like 1provided by RGD
Primary source
RGD:68955
See related
EnsemblRapid:ENSRNOG00000002746 AllianceGenome:RGD:68955
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Frp; Fstl
Summary
Predicted to enable calcium ion binding activity and heparin binding activity. Predicted to be involved in several processes, including endothelial cell differentiation; endothelial cell migration; and regulation of BMP signaling pathway. Predicted to act upstream of or within hematopoietic stem cell homeostasis. Predicted to be located in extracellular region. Orthologous to human FSTL1 (follistatin like 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Heart (RPKM 698.9), Lung (RPKM 673.0) and 9 other tissues See more
Orthologs
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Genomic context

See Fstl1 in Genome Data Viewer
Location:
11q21
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (76400870..76454053, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (62895391..62948581, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (65791196..65845721, complement)

Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene butyrophilin-like 12 Neighboring gene uncharacterized LOC134481074 Neighboring gene uncharacterized LOC134481075 Neighboring gene ribosomal protein S11, pseudogene 13 Neighboring gene NADH:ubiquinone oxidoreductase subunit B4

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Clone Names

  • MGC93410

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cell differentiation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in endothelial cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in endothelial cell differentiation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in endothelial cell migration ISO
Inferred from Sequence Orthology
more info
 
involved_in endothelial cell migration ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within hematopoietic stem cell homeostasis ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of apoptotic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of BMP signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in extracellular region IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
follistatin-related protein 1
Names
follistatin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_024369.2NP_077345.1  follistatin-related protein 1 precursor

    See identical proteins and their annotated locations for NP_077345.1

    Status: PROVISIONAL

    Source sequence(s)
    BC087014
    UniProtKB/Swiss-Prot
    Q62632
    UniProtKB/TrEMBL
    A0A8I5Y6A3
    Related
    ENSRNOP00000095289.2, ENSRNOT00000103472.3
    Conserved Domains (5) summary
    smart00274
    Location:2951
    FOLN; Follistatin-N-terminal domain-like
    smart00280
    Location:5296
    KAZAL; Kazal type serine protease inhibitors
    pfam13499
    Location:147218
    EF-hand_7; EF-hand domain pair
    cl08302
    Location:147218
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl17735
    Location:231278
    VWC; von Willebrand factor type C domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086029.1 Reference GRCr8

    Range
    76400870..76454053 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)