hspb11 heat shock protein, alpha-crystallin-related, b11 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: hspb11provided by ZNC
Official Full Name: heat shock protein, alpha-crystallin-related, b11provided by ZNC
Primary source: ZFIN:ZDB-GENE-061215-15
See related: Ensembl:ENSDARG00000067777 AllianceGenome:ZFIN:ZDB-GENE-061215-15
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:158640; si:dkey-57m14.2
Summary: Predicted to act upstream of or within intraciliary transport. Predicted to be part of intraciliary transport particle B. Predicted to be active in centrosome and cilium. Orthologous to human HSPB11 (heat shock protein family B (small) member 11). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (43807001..43808325)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (43206848..43208172)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within intraciliary transport	IEA Inferred from Electronic Annotation more info
involved_in regulation of response to external stimulus	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in centrosome	IBA Inferred from Biological aspect of Ancestor more info
is_active_in cilium	IBA Inferred from Biological aspect of Ancestor more info
part_of intraciliary transport particle B	IBA Inferred from Biological aspect of Ancestor more info
part_of intraciliary transport particle B	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: intraflagellar transport protein 25 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.