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TRAPPC4 trafficking protein particle complex subunit 4 [ Bos taurus (domestic cattle) ]

Gene ID: 785345, updated on 4-Oct-2024

Summary

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Official Symbol
TRAPPC4provided by VGNC
Official Full Name
trafficking protein particle complex subunit 4provided by VGNC
Primary source
VGNC:VGNC:36290
See related
BGD:BT30169; Ensembl:ENSBTAG00000008075
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See TRAPPC4 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (29590521..29594196)

Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene forkhead box R1 Neighboring gene centrosomal AT-AC splicing factor Neighboring gene ribosomal protein S25 Neighboring gene solute carrier family 37 member 4 Neighboring gene hypoxia up-regulated 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Clone Names

  • MGC134224

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAPP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking protein particle complex subunit 4
Names
trafficking protein particle complex 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001191204.1 → NP_001178133.1  trafficking protein particle complex subunit 4

    See identical proteins and their annotated locations for NP_001178133.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000015
    UniProtKB/Swiss-Prot
    Q2TBL9
    UniProtKB/TrEMBL
    A0AAA9TG80
    Related
    ENSBTAP00000010619.4, ENSBTAT00000010619.5
    Conserved Domains (1) summary
    cd14856
    Location:4 → 205
    TRAPPC4_synbindin; Trafficking protein particle complex subunit 4

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    29590521..29594196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015474687.1 → XP_015330173.1  trafficking protein particle complex subunit 4 isoform X1

    Conserved Domains (1) summary
    cl21566
    Location:45 → 103
    Sedlin_N; Sedlin, N-terminal conserved region
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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