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JCAD junctional cadherin 5 associated [ Bos taurus (domestic cattle) ]

Gene ID: 784675, updated on 4-Oct-2024

Summary

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Official Symbol
JCADprovided by VGNC
Official Full Name
junctional cadherin 5 associatedprovided by VGNC
Primary source
VGNC:VGNC:56189
See related
BGD:BT14938; Ensembl:ENSBTAG00000001204
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
KIAA1462
Orthologs
human mouse all
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Genomic context

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See JCAD in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (35027159..35105560, complement)

Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene supervillin Neighboring gene uncharacterized LOC132346894 Neighboring gene uncharacterized LOC132346895 Neighboring gene mitochondrial poly(A) polymerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ruffle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
junctional cadherin 5-associated protein
Names
junctional protein associated with coronary artery disease homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001082474.2 → NP_001075943.1  junctional cadherin 5-associated protein

    See identical proteins and their annotated locations for NP_001075943.1

    Status: PROVISIONAL

    Source sequence(s)
    BC133502
    UniProtKB/Swiss-Prot
    A2VE02
    UniProtKB/TrEMBL
    A0AAF7ACK8
    Related
    ENSBTAP00000001595.6, ENSBTAT00000001595.6
    Conserved Domains (1) summary
    pfam15351
    Location:1 → 1294
    JCAD; Junctional protein associated with coronary artery disease

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    35027159..35105560 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025000878.2 → XP_024856646.1  junctional cadherin 5-associated protein isoform X1

    UniProtKB/TrEMBL
    A0AAA9S9D3, A0AAF7ACK8
    Conserved Domains (1) summary
    pfam15351
    Location:1 → 1294
    JCAD; Junctional protein associated with coronary artery disease

  2. XM_025000880.2 → XP_024856648.1  junctional cadherin 5-associated protein isoform X3

    UniProtKB/TrEMBL
    A0AAA9SB38, A0AAF7ACK8
    Related
    ENSBTAP00000081114.1, ENSBTAT00000126236.1
    Conserved Domains (1) summary
    pfam15351
    Location:1 → 1294
    JCAD; Junctional protein associated with coronary artery disease

  3. XM_025000875.2 → XP_024856643.1  junctional cadherin 5-associated protein isoform X1

    UniProtKB/TrEMBL
    A0AAA9S9D3, A0AAF7ACK8
    Related
    ENSBTAP00000080540.1, ENSBTAT00000121861.1
    Conserved Domains (1) summary
    pfam15351
    Location:1 → 1294
    JCAD; Junctional protein associated with coronary artery disease

  4. XM_025000879.2 → XP_024856647.1  junctional cadherin 5-associated protein isoform X2

    UniProtKB/Swiss-Prot
    A2VE02
    UniProtKB/TrEMBL
    A0AAF7ACK8
    Conserved Domains (1) summary
    pfam15351
    Location:1 → 1294
    JCAD; Junctional protein associated with coronary artery disease

  5. XM_025000876.2 → XP_024856644.1  junctional cadherin 5-associated protein isoform X1

    UniProtKB/TrEMBL
    A0AAA9S9D3, A0AAF7ACK8
    Conserved Domains (1) summary
    pfam15351
    Location:1 → 1294
    JCAD; Junctional protein associated with coronary artery disease
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A2VE02.1 GenPept UniProtKB/Swiss-Prot:A2VE02

Gene LinkOut

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