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M1627_RS12140 alpha-L-rhamnosidase [ Sulfolobus islandicus M.16.27 ]

Gene ID: 7814000, updated on 10-Mar-2023

Summary

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Gene symbol
M1627_RS12140
Gene description
alpha-L-rhamnosidase
Locus tag
M1627_RS12140
Gene type
protein coding
Organism
Sulfolobus islandicus M.16.27 (strain: M.16.27)
Lineage
Archaea; Thermoproteota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus
Old locus tag
M1627_2413
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Genomic context

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Sequence:
NC_012632.1 (2259278..2261929)

NC_012632.1Genomic Context describing neighboring genes Neighboring gene alpha/beta fold hydrolase Neighboring gene enolase C-terminal domain-like protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012632.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Biogeography of the Sulfolobus islandicus pan-genome. Reno ML, et al. Proc Natl Acad Sci U S A, 2009 May 26. PMID 19435847, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
alpha-L-rhamnosidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012632.1 Reference assembly

    Range
    2259278..2261929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012712277.1 alpha-L-rhamnosidase [Sulfolobus islandicus]

    See identical proteins and their annotated locations for WP_012712277.1

    UniProtKB/TrEMBL
    C3MSB9, C3N1N9
    Conserved Domains (3) summary
    pfam05592
    Location:312 → 831
    Bac_rhamnosid; Bacterial alpha-L-rhamnosidase
    pfam08531
    Location:132 → 298
    Bac_rhamnosid_N; Alpha-L-rhamnosidase N-terminal domain
    cl17346
    Location:586 → 665
    Trehalase; Trehalase
Nucleotide Protein
Heading Accession and Version