zcchc10 zinc finger CCHC-type containing 10 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: zcchc10provided by Xenbase
Official Full Name: zinc finger CCHC-type containing 10provided by Xenbase
Primary source: Xenbase:XB-GENE-952785
See related: AllianceGenome:Xenbase:XB-GENE-952785
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary: Predicted to enable nucleic acid binding activity and zinc ion binding activity. Orthologous to human ZCCHC10 (zinc finger CCHC-type containing 10). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	3	NC_030679.2 (37641999..37657197)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	3	NC_030679.1 (28246724..28260332)

Chromosome 3 - NC_030679.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info
enables zinc ion binding	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: zinc finger CCHC domain-containing protein 10

Names: zinc finger, CCHC domain containing 10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001079166.1 → NP_001072634.1 zinc finger CCHC domain-containing protein 10

See identical proteins and their annotated locations for NP_001072634.1

Status: PROVISIONAL

Source sequence(s)

BC123087

UniProtKB/TrEMBL

Q05AZ3

Conserved Domains (1) summary

pfam13917
Location:17 → 53

zf-CCHC_3; Zinc knuckle

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

37641999..37657197

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_031898074.1 → XP_031753934.1 zinc finger CCHC domain-containing protein 10 isoform X1

UniProtKB/TrEMBL

A0A8J1J7T9

Conserved Domains (1) summary

pfam13917
Location:1 → 25

zf-CCHC_3; Zinc knuckle