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zbtb44 zinc finger and BTB domain containing 44 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 779914, updated on 5-Mar-2024

Summary

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Official Symbol
zbtb44provided by Xenbase
Official Full Name
zinc finger and BTB domain containing 44provided by Xenbase
Primary source
Xenbase:XB-GENE-1033035
See related
Ensembl:ENSXETG00000017921
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
btbd15; hspc063
Orthologs
human mouse all
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Genomic context

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See zbtb44 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (70132458..70171902)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (46804799..46844656, complement)

Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 15 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 8 Neighboring gene suppression of tumorigenicity 14 Neighboring gene toll-interleukin 1 receptor (TIR) domain containing adaptor protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC145247

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44
Names
BTB (POZ) domain containing 15

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001078991.1 → NP_001072459.1  zinc finger and BTB domain-containing protein 44

    See identical proteins and their annotated locations for NP_001072459.1

    Status: PROVISIONAL

    Source sequence(s)
    BC121859
    UniProtKB/Swiss-Prot
    Q0P4X6
    UniProtKB/TrEMBL
    A0A6I8QSF5
    Related
    ENSXETP00000071331.1, ENSXETT00000100134.2
    Conserved Domains (4) summary
    COG5048
    Location:378 → 444
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:396 → 416
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:13 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:408 → 433
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    70132458..70171902
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012966742.3 → XP_012822196.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A803JIL1, F7BTK0
    Related
    ENSXETP00000107759.1, ENSXETT00000118205.1
    Conserved Domains (5) summary
    COG5048
    Location:378 → 444
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:396 → 416
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:484 → 506
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:13 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:408 → 433
    zf-H2C2_2; Zinc-finger double domain

  2. XM_031905183.1 → XP_031761043.1  zinc finger and BTB domain-containing protein 44 isoform X2

    UniProtKB/TrEMBL
    A0A8J1JT20
    Conserved Domains (4) summary
    COG5048
    Location:56 → 122
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:74 → 94
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:162 → 184
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:86 → 111
    zf-H2C2_2; Zinc-finger double domain

  3. XM_031905182.1 → XP_031761042.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A803JIL1, F7BTK0
    Conserved Domains (5) summary
    COG5048
    Location:378 → 444
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:396 → 416
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:484 → 506
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:13 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:408 → 433
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0P4X6.1 GenPept UniProtKB/Swiss-Prot:Q0P4X6

Gene LinkOut

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