zfp2 ZFP2 zinc finger protein [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: zfp2provided by Xenbase
Official Full Name: ZFP2 zinc finger proteinprovided by Xenbase
Primary source: Xenbase:XB-GENE-6038858
See related: Ensembl:ENSXETG00000037225 AllianceGenome:Xenbase:XB-GENE-6038858
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: znf751
Summary: Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 9

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	9	NC_030685.2 (3156437..3161225, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	Unplaced Scaffold	NW_016683395.1 (508428..513216)

Chromosome 9 - NC_030685.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific	IBA Inferred from Biological aspect of Ancestor more info
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA Inferred from Biological aspect of Ancestor more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription	IEA Inferred from Electronic Annotation more info
involved_in regulation of transcription by RNA polymerase II	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: ZFP2 zinc finger protein

Names: zinc finger protein 2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001078916.1 → NP_001072384.1 ZFP2 zinc finger protein

See identical proteins and their annotated locations for NP_001072384.1

Status: PROVISIONAL

Source sequence(s)

BC121549

UniProtKB/TrEMBL

Q0V9I0

Related

ENSXETP00000093184.1, ENSXETT00000095666.2

Conserved Domains (4) summary

cd07765
Location:77 → 110

KRAB_A-box; KRAB (Kruppel-associated box) domain -A box

COG5048
Location:195 → 463

COG5048; FOG: Zn-finger [General function prediction only]

sd00017
Location:346 → 366

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam13465
Location:470 → 495

zf-H2C2_2; Zinc-finger double domain