U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

fam135a family with sequence similarity 135 member A [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 779489, updated on 4-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
fam135aprovided by Xenbase
Official Full Name
family with sequence similarity 135 member Aprovided by Xenbase
Primary source
Xenbase:XB-GENE-993079
See related
Ensembl:ENSXETG00000017907 AllianceGenome:Xenbase:XB-GENE-993079
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Orthologous to human FAM135A (family with sequence similarity 135 member A). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See fam135a in Genome Data Viewer
Location:
chromosome: 5
Exon count:
22
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (93111187..93174330, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (91149638..91213018)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene beta-1,3-glucuronyltransferase 2 Neighboring gene small ArfGAP 1 Neighboring gene succinate dehydrogenase complex assembly factor 4 Neighboring gene collagen, type IX, alpha 1 Neighboring gene collagen, type XIX, alpha 1 Neighboring gene uncharacterized LOC108647686

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
protein FAM135A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    93111187..93174330 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031902992.1 → XP_031758852.1  protein FAM135A isoform X1

    UniProtKB/TrEMBL
    A0A6I8RHR3, F7CBZ8
    Conserved Domains (2) summary
    pfam05057
    Location:1258 → 1453
    DUF676; Putative serine esterase (DUF676)
    pfam12394
    Location:110 → 170
    DUF3657; Protein FAM135

  2. XM_004914503.4 → XP_004914560.1  protein FAM135A isoform X2

    UniProtKB/TrEMBL
    A0A6I8PVW9, A0A6I8RHR3
    Related
    ENSXETP00000059692.2, ENSXETT00000061562.3
    Conserved Domains (2) summary
    pfam05057
    Location:1232 → 1427
    DUF676; Putative serine esterase (DUF676)
    pfam12394
    Location:110 → 170
    DUF3657; Protein of unknown function (DUF3657)

  3. XM_031902991.1 → XP_031758851.1  protein FAM135A isoform X1

    UniProtKB/TrEMBL
    A0A6I8RHR3, F7CBZ8
    Related
    ENSXETP00000038829.4, ENSXETT00000038829.4
    Conserved Domains (2) summary
    pfam05057
    Location:1258 → 1453
    DUF676; Putative serine esterase (DUF676)
    pfam12394
    Location:110 → 170
    DUF3657; Protein FAM135

  4. XM_004914506.4 → XP_004914563.1  protein FAM135A isoform X5

    UniProtKB/TrEMBL
    A0A6I8SMD4, A0A8J0R469
    Conserved Domains (2) summary
    pfam05057
    Location:1088 → 1283
    DUF676; Putative serine esterase (DUF676)
    pfam12394
    Location:110 → 170
    DUF3657; Protein of unknown function (DUF3657)

  5. XM_004914505.4 → XP_004914562.1  protein FAM135A isoform X4

    UniProtKB/TrEMBL
    A0A6I8SMD4, A0A8J0R3J4
    Conserved Domains (2) summary
    pfam05057
    Location:1114 → 1309
    DUF676; Putative serine esterase (DUF676)
    pfam12394
    Location:110 → 170
    DUF3657; Protein of unknown function (DUF3657)

  6. XM_018094346.2 → XP_017949835.1  protein FAM135A isoform X6

    UniProtKB/TrEMBL
    A0A6I8RYE7, A0A6I8SMD4
    Related
    ENSXETP00000089762.2, ENSXETT00000098387.2

  7. XM_004914504.4 → XP_004914561.1  protein FAM135A isoform X3

    UniProtKB/TrEMBL
    A0A6I8SFP7, A0A6I8SMD4
    Related
    ENSXETP00000091279.2, ENSXETT00000104533.2
    Conserved Domains (2) summary
    pfam05057
    Location:1124 → 1319
    DUF676; Putative serine esterase (DUF676)
    pfam12394
    Location:110 → 170
    DUF3657; Protein of unknown function (DUF3657)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.