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dhx33.L DEAH-box helicase 33 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 779441, updated on 4-Nov-2024

Summary

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Official Symbol
dhx33.L
Official Full Name
DEAH-box helicase 33 L homeolog
Primary source
Xenbase:XB-GENE-6252181
Locus tag
XELAEV_18012816mg
See related
EnsemblRapid:ENSXLAG00005002346 AllianceGenome:Xenbase:XB-GENE-6252181
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
dhx33
Summary
Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and RNA helicase activity. Predicted to act upstream of or within positive regulation of transcription by RNA polymerase I. Predicted to be located in nucleolus. Orthologous to human DHX33 (DEAH-box helicase 33). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See dhx33.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (105550686..105562794)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (99795616..99808257)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene MIS12 kinetochore complex component L homeolog Neighboring gene derlin 2 like L homeolog Neighboring gene derlin 2 L homeolog Neighboring gene uncharacterized LOC108708360 Neighboring gene Williams-Beuren syndrome cRCC1 likeL homeolog Neighboring gene centrosomal protein 97kDa L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC154339

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
  
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables helicase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase I IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ATP-dependent RNA helicase DHX33; DEAH-box helicase 33 L homeolog
Names
DEAH (Asp-Glu-Ala-His) box polypeptide 33

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    105550686..105562794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018245389.2 → XP_018100878.1  ATP-dependent RNA helicase DHX33

    UniProtKB/TrEMBL
    A0A1L8HGB0, A0A974HYH4
    Related
    ENSXLAP00005007050.1, ENSXLAT00005007159.1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001097059.1: Suppressed sequence

    Description
    NM_001097059.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein Strain
Heading Accession and Version

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