dnaaf5.L dynein, axonemal, assembly factor 5 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: dnaaf5.L
Official Full Name: dynein, axonemal, assembly factor 5 L homeolog
Primary source: Xenbase:XB-GENE-5902240
Locus tag: XELAEV_18045280mg
See related: EnsemblRapid:ENSXLAG00005014829
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: dnaaf5; heatr2
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 9_10L

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10L	NC_054387.1 (108297305..108334397, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	9_10L	NC_030740.1 (97723938..97761070, complement)

Chromosome 9_10L - NC_054387.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables dynein intermediate chain binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within cell projection organization	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cilium movement	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within inner dynein arm assembly	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within outer dynein arm assembly	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in dynein axonemal particle	IDA Inferred from Direct Assay more info	PubMed
located_in dynein axonemal particle	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: dynein axonemal assembly factor 5

Names: CG31320-PA; Dynein assembly factor 5, axonemal; HEAT repeat containing 2; HEAT repeat-containing protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001097038.1 → NP_001090507.1 dynein axonemal assembly factor 5

See identical proteins and their annotated locations for NP_001090507.1

Status: PROVISIONAL

Source sequence(s)

BC126027

UniProtKB/Swiss-Prot

A0JMW2

UniProtKB/TrEMBL

A0A974C0D9

Related

ENSXLAP00005043405.1, ENSXLAT00005044474.1

Conserved Domains (1) summary

sd00044
Location:21 → 47

HEAT; HEAT repeat [structural motif]

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

108297305..108334397 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)