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MGC147631.L acyl-CoA dehydrogenase (3J649) L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 779392, updated on 4-Nov-2024

Summary

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Official Symbol
MGC147631.L
Official Full Name
acyl-CoA dehydrogenase (3J649) L homeolog
Primary source
Xenbase:XB-GENE-5814095
Locus tag
XELAEV_18030872mg
See related
EnsemblRapid:ENSXLAG00005028130 AllianceGenome:Xenbase:XB-GENE-5814095
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to enable acyl-CoA dehydrogenase activity and flavin adenine dinucleotide binding activity. Predicted to act upstream of or within butyrate catabolic process and fatty acid beta-oxidation using acyl-CoA dehydrogenase. Predicted to be located in mitochondrion. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See MGC147631.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (32579106..32649752)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (30103164..30174196)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene tissue factor pathway inhibitor 2 L homeolog Neighboring gene guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 L homeolog Neighboring gene Bet1 golgi vesicular membrane trafficking protein L homeolog Neighboring gene collagen type I alpha 2 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC154345

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
  
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within butyrate catabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within fatty acid beta-oxidation using acyl-CoA dehydrogenase IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
acyl-CoA dehydrogenase (3J649) L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097010.1 → NP_001090479.1  acyl-CoA dehydrogenase (3J649) L homeolog

    See identical proteins and their annotated locations for NP_001090479.1

    Status: PROVISIONAL

    Source sequence(s)
    BC123150
    UniProtKB/TrEMBL
    A0A974CMB6, Q0IHH7
    Related
    ENSXLAP00005083754.1, ENSXLAT00005085392.1
    Conserved Domains (2) summary
    COG1960
    Location:42 → 423
    CaiA; Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]
    cl09933
    Location:44 → 417
    ACAD; Acyl-CoA dehydrogenase

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    32579106..32649752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041565603.1 → XP_041421537.1  acyl-CoA dehydrogenase (3J649) L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J1KW61
    Related
    ENSXLAP00005083836.1, ENSXLAT00005085473.1
    Conserved Domains (1) summary
    cl09933
    Location:34 → 370
    ACAD; Acyl-CoA dehydrogenase

  2. XM_041565601.1 → XP_041421535.1  acyl-CoA dehydrogenase (3J649) L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1KW58
    Related
    ENSXLAP00005083683.1, ENSXLAT00005085322.1
    Conserved Domains (1) summary
    cl09933
    Location:44 → 393
    ACAD; Acyl-CoA dehydrogenase

  3. XM_041565602.1 → XP_041421536.1  acyl-CoA dehydrogenase (3J649) L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1KW58
    Conserved Domains (1) summary
    cl09933
    Location:44 → 393
    ACAD; Acyl-CoA dehydrogenase
Nucleotide Protein Strain
Heading Accession and Version

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