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phospho2.L phosphatase, orphan 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 779316, updated on 7-Sep-2023

Summary

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Official Symbol
phospho2.L
Official Full Name
phosphatase, orphan 2 L homeolog
Primary source
Xenbase:XB-GENE-6252468
Locus tag
XELAEV_18044667mg
See related
EnsemblRapid:ENSXLAG00005032571
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
phospho2
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See phospho2.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (75275329..75279931)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (64769977..64774579)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase G (cyclophilin G) L homeolog Neighboring gene cilia and flagella associated protein 210 L homeolog Neighboring gene kelch like family member 23 L homeolog Neighboring gene Sjogren syndrome antigen B L homeolog Neighboring gene methyltransferase 5, N6-adenosine L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
phosphatase, orphan 2 L homeolog
NP_001090404.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096935.1 → NP_001090404.1  phosphatase, orphan 2 L homeolog

    See identical proteins and their annotated locations for NP_001090404.1

    Status: PROVISIONAL

    Source sequence(s)
    BC123351
    UniProtKB/TrEMBL
    A0A974BZ24, Q0IH26
    Related
    ENSXLAP00005097583.1, ENSXLAT00005099375.1
    Conserved Domains (2) summary
    pfam00702
    Location:4 → 184
    Hydrolase; haloacid dehalogenase-like hydrolase
    cl21460
    Location:3 → 236
    HAD_like; Haloacid Dehalogenase-like Hydrolases

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    75275329..75279931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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