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ppp1r8.S protein phosphatase 1 regulatory subunit 8 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 779310, updated on 4-Nov-2024

Summary

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Official Symbol
ppp1r8.S
Official Full Name
protein phosphatase 1 regulatory subunit 8 S homeolog
Primary source
Xenbase:XB-GENE-17338132
Locus tag
XELAEV_18015128mg
See related
EnsemblRapid:ENSXLAG00005009687 AllianceGenome:Xenbase:XB-GENE-17338132
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ard1; ard-1; nipp1; nipp-1; ppp1r8
Summary
Predicted to enable mRNA binding activity and protein serine/threonine phosphatase inhibitor activity. Predicted to be located in nuclear speck. Orthologous to human PPP1R8 (protein phosphatase 1 regulatory subunit 8). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ppp1r8.S in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (69703588..69715394, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (65283839..65295686, complement)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene replication protein A2 S homeolog Neighboring gene thymocyte selection associated family member 2 S homeolog Neighboring gene small Cajal body-specific RNA 1 Neighboring gene mannosidase, endo-alpha-like S homeolog Neighboring gene uncharacterized LOC121400580

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC154817

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine phosphatase inhibitor activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nuclear speck IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein phosphatase 1 regulatory subunit 8 S homeolog
Names
protein phosphatase 1 regulatory inhibitor subunit 8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096929.1 → NP_001090398.1  protein phosphatase 1 regulatory subunit 8 S homeolog

    See identical proteins and their annotated locations for NP_001090398.1

    Status: PROVISIONAL

    Source sequence(s)
    BC123342
    UniProtKB/TrEMBL
    A0A974DPM2, A0A974HW27, Q05AU6
    Related
    ENSXLAP00005028372.1, ENSXLAT00005029109.1
    Conserved Domains (2) summary
    COG1716
    Location:29 → 148
    FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
    cd00060
    Location:25 → 117
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    69703588..69715394 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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