ptar1.L protein prenyltransferase alpha subunit repeat containing 1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: ptar1.L
Official Full Name: protein prenyltransferase alpha subunit repeat containing 1 L homeolog
Primary source: Xenbase:XB-GENE-5829656
Locus tag: XELAEV_18006877mg
See related: EnsemblRapid:ENSXLAG00005006428
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: ptar1; ptar1-a; ptar1-b
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Genomic context

Location:: chromosome: 1L

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1L	NC_054371.1 (140335115..140368689, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1L	NC_030724.1 (127918339..127952051, complement)

Chromosome 1L - NC_054371.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables prenyltransferase activity	IEA Inferred from Electronic Annotation more info
enables protein prenyltransferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within protein prenylation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: protein prenyltransferase alpha subunit repeat-containing protein 1-A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001096887.1 → NP_001090356.1 protein prenyltransferase alpha subunit repeat-containing protein 1-A

See identical proteins and their annotated locations for NP_001090356.1

Status: PROVISIONAL

Source sequence(s)

BC123230

UniProtKB/Swiss-Prot

A1L3L1, Q0IHB3

UniProtKB/TrEMBL

A0A974E016

Related

ENSXLAP00005019095.1, ENSXLAT00005019431.1

Conserved Domains (1) summary

pfam01239
Location:180 → 207

PPTA; Protein prenyltransferase alpha subunit repeat

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

140335115..140368689 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)