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ppdpf.L pancreatic progenitor cell differentiation and proliferation factor L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 779234, updated on 4-Nov-2024

Summary

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Official Symbol
ppdpf.L
Official Full Name
pancreatic progenitor cell differentiation and proliferation factor L homeolog
Primary source
Xenbase:XB-GENE-6252795
Locus tag
XELAEV_18043589mg
See related
EnsemblRapid:ENSXLAG00005025878 AllianceGenome:Xenbase:XB-GENE-6252795
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
exdpf; ppdpf; exdpf-b; ppdpf-a; ppdpf-b; c20orf149
Summary
Predicted to act upstream of or within cell differentiation. Orthologous to human PPDPF (pancreatic progenitor cell differentiation and proliferation factor). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ppdpf.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (17570274..17578096)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (17477596..17485411)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene potassium channel, voltage gated KQT-like subfamily Q, member 2 L homeolog Neighboring gene eukaryotic translation elongation factor 1 alpha 2 L homeolog Neighboring gene protein tyrosine kinase 6 L homeolog Neighboring gene tyrosine-protein kinase Srms

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC154389

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within cell differentiation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
pancreatic progenitor cell differentiation and proliferation factor B
Names
UPF0362 protein C20orf149 homolog B
exocrine differentiation and proliferation factor B
pancreatic progenitor cell differentiation and proliferation factor homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096856.1 → NP_001090325.1  pancreatic progenitor cell differentiation and proliferation factor B

    See identical proteins and their annotated locations for NP_001090325.1

    Status: PROVISIONAL

    Source sequence(s)
    BC123172
    UniProtKB/Swiss-Prot
    Q0IHF8
    UniProtKB/TrEMBL
    A0A974H2Z8
    Related
    ENSXLAP00005076918.1, ENSXLAT00005078510.1
    Conserved Domains (1) summary
    pfam15060
    Location:1 → 110
    PPDFL; Differentiation and proliferation regulator

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    17570274..17578096
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0IHF8.1 GenPept UniProtKB/Swiss-Prot:Q0IHF8

Gene LinkOut

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