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MGC154351 uncharacterized protein MGC154351 [ Xenopus laevis (African clawed frog) ]

Gene ID: 779221, updated on 18-Aug-2023

Summary

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Gene symbol
MGC154351
Gene description
uncharacterized protein MGC154351
Locus tag
XELAEV_18037986mg
See related
EnsemblRapid:ENSXLAG00005011283
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See MGC154351 in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (110522168..110561522, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (86814796..86837775)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene capping actin protein of muscle Z-line subunit beta S homeolog Neighboring gene solute carrier family 66 member 1 S homeolog Neighboring gene aldo-keto reductase family 7, member A2 S homeolog Neighboring gene U7 small nuclear RNA Neighboring gene U7 small nuclear RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
Lysosomal amino acid transporter 1 homolog-like; uncharacterized protein LOC779221

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096843.1 → NP_001090312.1  Lysosomal amino acid transporter 1 homolog-like

    See identical proteins and their annotated locations for NP_001090312.1

    Status: PROVISIONAL

    Source sequence(s)
    BC123154
    UniProtKB/TrEMBL
    A0A974CDA1, Q0IHH3
    Related
    ENSXLAP00005033141.1, ENSXLAT00005033935.1
    Conserved Domains (1) summary
    pfam04193
    Location:188 → 242
    PQ-loop; PQ loop repeat

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    110522168..110561522 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018227053.2 → XP_018082542.1  uncharacterized protein LOC779221 isoform X1

    UniProtKB/TrEMBL
    A0A8J0TB66, A0A974CDA1
Nucleotide Protein Strain
Heading Accession and Version

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