ssh2.L slingshot protein phosphatase 2 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: ssh2.L
Official Full Name: slingshot protein phosphatase 2 L homeolog
Primary source: Xenbase:XB-GENE-6252803
Locus tag: XELAEV_18011670mg
See related: EnsemblRapid:ENSXLAG00005025054 AllianceGenome:Xenbase:XB-GENE-6252803
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: ssh2
Summary: Predicted to enable actin binding activity and phosphoprotein phosphatase activity. Predicted to act upstream of or within actin cytoskeleton organization and negative regulation of actin filament polymerization. Predicted to be located in cytoplasm. Orthologous to human SSH2 (slingshot protein phosphatase 2). [provided by Alliance of Genome Resources, Nov 2024]
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 2L

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (31274961..31410881, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (30997461..31133490, complement)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables actin binding	IEA Inferred from Electronic Annotation more info
enables phosphatase activity	IEA Inferred from Electronic Annotation more info
enables phosphoprotein phosphatase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within actin cytoskeleton organization	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within negative regulation of actin filament polymerization	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: slingshot protein phosphatase 2 L homeolog

Names: slingshot homolog 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001096832.1 → NP_001090301.1 slingshot protein phosphatase 2 L homeolog

See identical proteins and their annotated locations for NP_001090301.1

Status: PROVISIONAL

Source sequence(s)

BC123130

UniProtKB/TrEMBL

Q0IHJ4

Related

ENSXLAP00005074626.1, ENSXLAT00005076205.1

Conserved Domains (1) summary

cd11652
Location:3 → 92

SSH-N; N-terminal domain conserved in slingshot (SSH) phosphatases

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

31274961..31410881 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)