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eif2s2.S eukaryotic translation initiation factor 2 subunit beta S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 779195, updated on 4-Nov-2024

Summary

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Official Symbol
eif2s2.S
Official Full Name
eukaryotic translation initiation factor 2 subunit beta S homeolog
Primary source
Xenbase:XB-GENE-17332921
Locus tag
XELAEV_18046614mg
See related
EnsemblRapid:ENSXLAG00005026486 AllianceGenome:Xenbase:XB-GENE-17332921
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to enable mRNA binding activity; translation initiation factor activity; and translation initiation factor binding activity. Predicted to act upstream of or within formation of cytoplasmic translation initiation complex and formation of translation preinitiation complex. Predicted to be part of eukaryotic translation initiation factor 2 complex. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See eif2s2.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (36018691..36031955)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (29905634..29918701)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene adenosylhomocysteinase S homeolog Neighboring gene agouti signaling protein S homeolog Neighboring gene RALY heterogeneous nuclear ribonucleoprotein S homeolog Neighboring gene myosin, heavy chain 7B, cardiac muscle, beta S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC130708

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
  
enables translation initiation factor binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within formation of cytoplasmic translation initiation complex IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within formation of translation preinitiation complex IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within translational initiation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of eukaryotic translation initiation factor 2 complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC779195

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096817.1 → NP_001090286.1  uncharacterized protein LOC779195

    See identical proteins and their annotated locations for NP_001090286.1

    Status: PREDICTED

    Source sequence(s)
    BC106256
    UniProtKB/TrEMBL
    A0A974H115, Q3KQE0
    Related
    ENSXLAP00005078802.1, ENSXLAT00005080393.1
    Conserved Domains (1) summary
    smart00653
    Location:198 → 307
    eIF2B_5; domain present in translation initiation factor eIF2B and eIF5

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    36018691..36031955
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041577883.1 → XP_041433817.1  uncharacterized protein LOC779195 isoform X2

    UniProtKB/TrEMBL
    A0A8J1LWC1
    Related
    ENSXLAP00005078737.1, ENSXLAT00005080328.1
    Conserved Domains (1) summary
    smart00653
    Location:198 → 288
    eIF2B_5; domain present in translation initiation factor eIF2B and eIF5

  2. XM_041577884.1 → XP_041433818.1  uncharacterized protein LOC779195 isoform X3

    UniProtKB/TrEMBL
    A0A8J1LWE8
    Conserved Domains (1) summary
    smart00653
    Location:197 → 287
    eIF2B_5; domain present in translation initiation factor eIF2B and eIF5

  3. XM_041577882.1 → XP_041433816.1  uncharacterized protein LOC779195 isoform X1

    UniProtKB/TrEMBL
    A0A8J1LXQ5
    Conserved Domains (1) summary
    smart00653
    Location:197 → 306
    eIF2B_5; domain present in translation initiation factor eIF2B and eIF5
Nucleotide Protein Strain
Heading Accession and Version

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