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otor.L otoraplin L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 779155, updated on 1-Jun-2022

Summary

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Official Symbol
otor.L
Official Full Name
otoraplin L homeolog
Primary source
Xenbase:XB-GENE-980495
Locus tag
XELAEV_18026469mg
See related
EnsemblRapid:ENSXLAG00005030112
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
fdp; mial; otor; mial1
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Genomic context

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See otor.L in Genome Data Viewer
Location:
chromosome: 5L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (28473744..28484274)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (27706624..27717154)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121393520 Neighboring gene small nuclear ribonucleoprotein polypeptide B L homeolog Neighboring gene proprotein convertase subtilisin/kexin type 2 L homeolog Neighboring gene beaded filament structural protein 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC86203

General protein information

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Preferred Names
otoraplin L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096781.1 → NP_001090250.1  otoraplin L homeolog

    See identical proteins and their annotated locations for NP_001090250.1

    Status: PROVISIONAL

    Source sequence(s)
    BC080401
    UniProtKB/TrEMBL
    Q0VGX1
    Related
    ENSXLAP00005090052.1, ENSXLAT00005091728.1
    Conserved Domains (1) summary
    cd11891
    Location:34 → 116
    MIAL; Melanoma Inhibitory Activity-Like protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    28473744..28484274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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