U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

fam43a.L family with sequence similarity 43 member A L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 779147, updated on 4-Nov-2024

Summary

Official Symbol
fam43a.L
Official Full Name
family with sequence similarity 43 member A L homeolog
Primary source
Xenbase:XB-GENE-5860905
Locus tag
XELAEV_18027522mg
See related
EnsemblRapid:ENSXLAG00005030830 AllianceGenome:Xenbase:XB-GENE-5860905
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
fam43a
Summary
Orthologous to human FAM43A (family with sequence similarity 43 member A). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See fam43a.L in Genome Data Viewer
Location:
chromosome: 5L
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (113534080..113538106, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (102839758..102843784, complement)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 L homeolog Neighboring gene U2 spliceosomal RNA Neighboring gene large 60S subunit nuclear export GTPase 1 L homeolog Neighboring gene transmembrane protein 44 L homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
uncharacterized protein LOC779147
Names
family with sequence similarity 43, member A

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096773.1NP_001090242.1  uncharacterized protein LOC779147

    See identical proteins and their annotated locations for NP_001090242.1

    Status: PREDICTED

    Source sequence(s)
    BC079698
    UniProtKB/TrEMBL
    A0A974CVM7, Q6AX96
    Related
    ENSXLAP00005092293.1, ENSXLAT00005093976.1
    Conserved Domains (1) summary
    pfam14719
    Location:67252
    PID_2; Phosphotyrosine interaction domain (PTB/PID)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    113534080..113538106 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)