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b3galt6 beta-1,3-galactosyltransferase 6 [ Ciona intestinalis (vase tunicate) ]

Gene ID: 778996, updated on 21-Dec-2023

Summary

Gene symbol
b3galt6
Gene description
beta-1,3-galactosyltransferase 6
See related
Ensembl:ENSCING00000025068
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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Genomic context

See b3galt6 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
1
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) 14 NC_020179.2 (1429946..1431025)

Chromosome 14 - NC_020179.2Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptor like protein Neighboring gene sodium-coupled monocarboxylate transporter 1-like Neighboring gene uncharacterized LOC100179067 Neighboring gene protein-glutamine gamma-glutamyltransferase K Neighboring gene translation initiation factor eIF-2B subunit epsilon-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_020179.2 Chromosome 14 Reference KH Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
beta-1,3-galactosyltransferase 6
NP_001072016.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001078548.1NP_001072016.1  beta-1,3-galactosyltransferase 6

    See identical proteins and their annotated locations for NP_001072016.1

    Status: PROVISIONAL

    Source sequence(s)
    AM235754
    UniProtKB/TrEMBL
    A0A1W2VQL9, Q256Z9
    Related
    ENSCINP00000032620, ENSCINT00000030604
    Conserved Domains (1) summary
    cl21608
    Location:69258
    Galactosyl_T; Galactosyltransferase

RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NC_020179.2 Reference KH Primary Assembly

    Range
    1429946..1431025
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)