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uglcat1 beta-1,3-glucuronosyltransferase [ Ciona intestinalis (vase tunicate) ]

Gene ID: 778533, updated on 21-Dec-2023

Summary

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Gene symbol
uglcat1
Gene description
beta-1,3-glucuronosyltransferase
See related
Ensembl:ENSCING00000003206 Ensembl:ENSCING00000016397
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
Also known as
B3gat3
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Genomic context

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See uglcat1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) Unplaced Scaffold NW_004190427.2 (45996..49606, complement)

NW_004190427.2Genomic Context describing neighboring genes Neighboring gene microRNA mir-4045 Neighboring gene transcription factor protein Neighboring gene uncharacterized LOC113475110 Neighboring gene mycophenolic acid acyl-glucuronide esterase, mitochondrial-like Neighboring gene mycophenolic acid acyl-glucuronide esterase, mitochondrial-like Neighboring gene coiled-coil domain-containing protein 96 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004190427 Unplaced Scaffold Reference KH Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-glucuronosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001078180.1 → NP_001071648.1  beta-1,3-glucuronosyltransferase

    See identical proteins and their annotated locations for NP_001071648.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ972872
    UniProtKB/TrEMBL
    A0A1W2VPL2, F6S3J8, Q4VYB1
    Related
    ENSCINP00000006544, ENSCINT00000006544
    Conserved Domains (1) summary
    cd00218
    Location:88 → 318
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis

RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NW_004190427.2 Reference KH Primary Assembly

    Range
    45996..49606 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026838707.1 → XP_026694508.1  beta-1,3-glucuronosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A1W2VPL2, F6S3J8, Q4VYB1
    Conserved Domains (1) summary
    cd00218
    Location:88 → 318
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis

  2. XM_026838708.1 → XP_026694509.1  beta-1,3-glucuronosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A1W2VPL2, F6S3J8, Q4VYB1
    Conserved Domains (1) summary
    cd00218
    Location:88 → 318
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis

  3. XM_004227130.4 → XP_004227178.1  beta-1,3-glucuronosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A1W2WQ66, F6S4Z3
    Related
    ENSCINP00000028429
Nucleotide Protein
Heading Accession and Version

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