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dtd D-aminoacyl-tRNA deacylase [ Xanthomonas oryzae pv. oryzicola ]

Gene ID: 77335929, updated on 10-Oct-2024

Summary

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Gene symbol
dtd
Gene description
D-aminoacyl-tRNA deacylase
Locus tag
XOCgx_RS02785
Gene type
protein coding
Organism
Xanthomonas oryzae pv. oryzicola (strain: GX01, pathovar: oryzicola)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas
Old locus tag
XOCgx_0612
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Genomic context

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NZ_CP043403.1Genomic Context describing neighboring genes Neighboring gene GNAT family N-acetyltransferase Neighboring gene ncRNA Neighboring gene lauroyl acyltransferase Neighboring gene RNA polymerase sigma factor RpoD Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP043403.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Recent Updates on DTD (D-Tyr-tRNA(Tyr) Deacylase): An Enzyme Essential for Fidelity and Quality of Protein Synthesis. Bhatt TK, et al. Front Cell Dev Biol, 2016. PMID 27200345, Free PMC Article
  2. Structure of crystalline D-Tyr-tRNA(Tyr) deacylase. A representative of a new class of tRNA-dependent hydrolases. Ferri-Fioni ML, et al. J Biol Chem, 2001 Dec 14. PMID 11568181
  3. Single molecule real-time sequencing of Xanthomonas oryzae genomes reveals a dynamic structure and complex TAL (transcription activator-like) effector gene relationships. Booher NJ, et al. Microb Genom, 2015 Oct. PMID 27148456, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
D-aminoacyl-tRNA deacylase
WP_011257505.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP043403.1 Reference assembly

    Range
    575001..575441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011257505.1 MULTISPECIES: D-aminoacyl-tRNA deacylase [Xanthomonas]

    See identical proteins and their annotated locations for WP_011257505.1

    UniProtKB/Swiss-Prot
    Q2P814, Q5H5B9
    UniProtKB/TrEMBL
    A0A7T4SLF2, G7TJH8
    Conserved Domains (1) summary
    PRK05273
    Location:1 → 145
    PRK05273; D-tyrosyl-tRNA(Tyr) deacylase; Provisional
Nucleotide Protein
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