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dapE succinyl-diaminopimelate desuccinylase [ Aliivibrio fischeri MJ11 ]

Gene ID: 77253182, discontinued on 23-Aug-2024
  • This record was discontinued.

Summary

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Gene symbol
dapE
Gene description
succinyl-diaminopimelate desuccinylase
Locus tag
VFMJ11_RS17280
Gene type
protein coding
Organism
Aliivibrio fischeri MJ11 (strain: MJ11)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio
Old locus tag
VFMJ11_2048
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Genomic context

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Location:
chromosome: I
Sequence:
Chromosome: I; NC_011184.1 (2173140..2174273)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011184.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A single regulatory gene is sufficient to alter bacterial host range. Mandel MJ, et al. Nature, 2009 Mar 12. PMID 19182778, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
succinyl-diaminopimelate desuccinylase
WP_012533377.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011184.1 Reference assembly

    Range
    2173140..2174273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012533377.1 succinyl-diaminopimelate desuccinylase [Aliivibrio fischeri]

    See identical proteins and their annotated locations for WP_012533377.1

    Conserved Domains (2) summary
    cd03891
    Location:7 → 372
    M20_DapE_proteobac; M20 Peptidase proteobacterial DapE encoded N-succinyl-L,L-diaminopimelic acid desuccinylase
    PRK13009
    Location:4 → 377
    PRK13009; succinyl-diaminopimelate desuccinylase; Reviewed
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B5FGX0.1