U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

deoA thymidine phosphorylase [ Aliivibrio fischeri MJ11 ]

Gene ID: 77251680, discontinued on 23-Aug-2024
  • This record was discontinued.

Summary

Go to the top of the page Help
Gene symbol
deoA
Gene description
thymidine phosphorylase
Locus tag
VFMJ11_RS09630
Gene type
protein coding
Organism
Aliivibrio fischeri MJ11 (strain: MJ11)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio
Old locus tag
VFMJ11_0507
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: I
Sequence:
Chromosome: I; NC_011184.1 (531562..532893)

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_011184.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Preferred Names
thymidine phosphorylase
WP_012533167.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011184.1 Reference assembly

    Range
    531562..532893
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012533167.1 thymidine phosphorylase [Aliivibrio fischeri]

    See identical proteins and their annotated locations for WP_012533167.1

    Conserved Domains (4) summary
    PRK05820
    Location:1 → 440
    deoA; thymidine phosphorylase; Reviewed
    smart00941
    Location:350 → 424
    PYNP_C; Pyrimidine nucleoside phosphorylase C-terminal domain
    pfam00591
    Location:78 → 310
    Glycos_transf_3; Glycosyl transferase family, a/b domain
    pfam02885
    Location:6 → 66
    Glycos_trans_3N; Glycosyl transferase family, helical bundle domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B5FA99.1