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rbsD D-ribose pyranase [ Pasteurella multocida ]

Gene ID: 77207504, updated on 3-Apr-2024

Summary

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Gene symbol
rbsD
Gene description
D-ribose pyranase
Locus tag
A6J57_RS07325
Gene type
protein coding
Organism
Pasteurella multocida (strain: FDAARGOS_218, serotype: Heddleston Type 3; Serotype A:3, nat-host: Environment, culture-collection: FDA:FDAARGOS_218)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurella
Old locus tag
A6J57_07310
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Genomic context

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NZ_CP020405.2Genomic Context describing neighboring genes Neighboring gene ribose ABC transporter permease Neighboring gene ribose ABC transporter ATP-binding protein RbsA Neighboring gene excalibur calcium-binding domain-containing protein Neighboring gene zinc ribbon domain-containing protein YjdM

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP020405.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystallization and preliminary X-ray crystallographic analysis of Escherichia coli RbsD, a component of the ribose-transport system with unknown biochemical function. Kim MS, et al. Acta Crystallogr D Biol Crystallogr, 2001 May. PMID 11320319
  2. Crystal structures of RbsD leading to the identification of cytoplasmic sugar-binding proteins with a novel folding architecture. Kim MS, et al. J Biol Chem, 2003 Jul 25. PMID 12738765
  3. NMR application probes a novel and ubiquitous family of enzymes that alter monosaccharide configuration. Ryu KS, et al. J Biol Chem, 2004 Jun 11. PMID 15060078
  4. Structural insights into the monosaccharide specificity of Escherichia coli rhamnose mutarotase. Ryu KS, et al. J Mol Biol, 2005 May 27. PMID 15876375

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
D-ribose pyranase
WP_005751129.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP020405.2 Reference assembly

    Range
    1542718..1543137 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005751129.1 D-ribose pyranase [Pasteurella multocida]

    See identical proteins and their annotated locations for WP_005751129.1

    UniProtKB/Swiss-Prot
    Q9CP97
    UniProtKB/TrEMBL
    A0A1E3XJ05
    Conserved Domains (1) summary
    PRK11797
    Location:1 → 139
    PRK11797; D-ribose pyranase; Provisional
Nucleotide Protein
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