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def peptide deformylase [ Pasteurella multocida ]

Gene ID: 77206876, updated on 6-Jun-2024

Summary

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Gene symbol
def
Gene description
peptide deformylase
Locus tag
A6J57_RS04165
Gene type
protein coding
Organism
Pasteurella multocida (strain: FDAARGOS_218, serotype: Heddleston Type 3; Serotype A:3, nat-host: Environment, culture-collection: FDA:FDAARGOS_218)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurella
Old locus tag
A6J57_04150
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Genomic context

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NZ_CP020405.2Genomic Context describing neighboring genes Neighboring gene glycosyltransferase family A protein Neighboring gene 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB Neighboring gene methionyl-tRNA formyltransferase Neighboring gene 23S ribosomal RNA Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP020405.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative Genomics Analysis of Two Different Virulent Bovine Pasteurella multocida Isolates. Du H, et al. Int J Genomics, 2016. PMID 28070502, Free PMC Article
  2. Structure-function relationships within the peptide deformylase family. Evidence for a conserved architecture of the active site involving three conserved motifs and a metal ion. Meinnel T, et al. J Mol Biol, 1997 Apr 4. PMID 9126850

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
peptide deformylase
WP_005718266.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP020405.2 Reference assembly

    Range
    856715..857227 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005718266.1 MULTISPECIES: peptide deformylase [Pasteurella]

    See identical proteins and their annotated locations for WP_005718266.1

    UniProtKB/Swiss-Prot
    P57948
    UniProtKB/TrEMBL
    A0A1E3XNE1, A0AAD2XEB7
    Conserved Domains (1) summary
    PRK00150
    Location:1 → 163
    def; peptide deformylase; Reviewed
Nucleotide Protein
Heading Accession and Version