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SLC1A4 solute carrier family 1 member 4 [ Gallus gallus (chicken) ]

Gene ID: 769612, updated on 17-Aug-2024

Summary

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Symbol
SLC1A4provided by CGNC
Full Name
solute carrier family 1 member 4provided by CGNC
Primary source
CGNC:6687
See related
Ensembl:ENSGALG00010019257
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See SLC1A4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (10107370..10139945)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (10052526..10085161)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene aftiphilin Neighboring gene SERTA domain containing 2 Neighboring gene uncharacterized LOC107052012 Neighboring gene centrosomal protein 68 Neighboring gene uncharacterized LOC101750701 Neighboring gene RAB1B, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-alanine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables L-aspartate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables L-serine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables L-threonine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-glutamate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in L-serine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral amino acid transporter A
Names
solute carrier family 1 (glutamate/neutral amino acid transporter), member 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    10107370..10139945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001232899.7 → XP_001232900.3  neutral amino acid transporter A isoform X1

    UniProtKB/TrEMBL
    E1BRV6
    Related
    ENSGALP00010027715.1, ENSGALT00010046550.1
    Conserved Domains (1) summary
    pfam00375
    Location:44 → 474
    SDF; Sodium:dicarboxylate symporter family

  2. XM_046939643.1 → XP_046795599.1  neutral amino acid transporter A isoform X2

  3. XM_046939644.1 → XP_046795600.1  neutral amino acid transporter A isoform X3

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    10052526..10085161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040666934.2 → XP_040522868.1  neutral amino acid transporter A isoform X1

    UniProtKB/TrEMBL
    E1BRV6
    Conserved Domains (1) summary
    pfam00375
    Location:44 → 474
    SDF; Sodium:dicarboxylate symporter family

  2. XM_046914470.1 → XP_046770426.1  neutral amino acid transporter A isoform X2

  3. XM_046914471.1 → XP_046770427.1  neutral amino acid transporter A isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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