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AP3B2 adaptor related protein complex 3 beta 2 subunit [ Gallus gallus (chicken) ]

Gene ID: 769343, updated on 10-Oct-2024

Summary

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Official Symbol
AP3B2provided by CGNC
Official Full Name
adaptor related protein complex 3 beta 2 subunitprovided by CGNC
Primary source
CGNC:1524
See related
Ensembl:ENSGALG00010023384
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See AP3B2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
28
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 10 NC_052541.1 (1391840..1402832, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 10 NC_052582.1 (1265648..1276665, complement)

Chromosome 10 - NC_052541.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA71 Neighboring gene ribosomal protein S17 Neighboring gene cytoplasmic polyadenylation element binding protein 1 Neighboring gene microRNA 1688 Neighboring gene uncharacterized LOC112533211 Neighboring gene epididymal protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in anterograde synaptic vesicle transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-3 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-3 complex subunit beta-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052541.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1391840..1402832 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046899217.1 → XP_046755173.1  AP-3 complex subunit beta-2 isoform X5

  2. XM_040706559.2 → XP_040562493.1  AP-3 complex subunit beta-2 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZSZ5
    Conserved Domains (2) summary
    COG5096
    Location:46 → 605
    COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]

  3. XM_040706558.2 → XP_040562492.1  AP-3 complex subunit beta-2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZSZ5
    Conserved Domains (2) summary
    COG5096
    Location:46 → 605
    COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]

  4. XM_025153928.3 → XP_025009696.2  AP-3 complex subunit beta-2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZSZ5, A0A8V0ZUZ9
    Related
    ENSGALP00010034674.1, ENSGALT00010057014.1
    Conserved Domains (2) summary
    COG5096
    Location:46 → 605
    COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]

  5. XM_040706557.2 → XP_040562491.1  AP-3 complex subunit beta-2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZSZ5
    Conserved Domains (2) summary
    COG5096
    Location:46 → 605
    COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]

  6. XM_040706560.2 → XP_040562494.1  AP-3 complex subunit beta-2 isoform X6

    UniProtKB/TrEMBL
    A0A8V0ZSZ5
    Conserved Domains (2) summary
    COG5096
    Location:46 → 605
    COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052582.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1265648..1276665 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046925292.1 → XP_046781248.1  AP-3 complex subunit beta-2 isoform X5

  2. XM_040680083.2 → XP_040536017.1  AP-3 complex subunit beta-2 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZSZ5
    Conserved Domains (2) summary
    COG5096
    Location:46 → 605
    COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]

  3. XM_040680081.2 → XP_040536015.1  AP-3 complex subunit beta-2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZSZ5
    Conserved Domains (2) summary
    COG5096
    Location:46 → 605
    COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]

  4. XM_040680082.2 → XP_040536016.1  AP-3 complex subunit beta-2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZSZ5
    Conserved Domains (3) summary
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:34 → 587
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:827 → 972
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  5. XM_040680080.2 → XP_040536014.1  AP-3 complex subunit beta-2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZSZ5
    Conserved Domains (2) summary
    COG5096
    Location:46 → 605
    COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]

  6. XM_040680084.2 → XP_040536018.1  AP-3 complex subunit beta-2 isoform X6

    UniProtKB/TrEMBL
    A0A8V0ZSZ5
    Conserved Domains (2) summary
    COG5096
    Location:46 → 605
    COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
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