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TOB1 transducer of ERBB2, 1 [ Bos taurus (domestic cattle) ]

Gene ID: 768016, updated on 4-Oct-2024

Summary

Official Symbol
TOB1provided by VGNC
Official Full Name
transducer of ERBB2, 1provided by VGNC
Primary source
VGNC:VGNC:36212
See related
Ensembl:ENSBTAG00000000546
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Annotation information
Note: GeneIDs: 768016 and 784737 are annotated independently on Btau_4.6.1, but may be redundant loci. [17 Jun 2014]
Orthologs
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Genomic context

See TOB1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (35883032..35886943)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene sperm associated antigen 9 Neighboring gene small nucleolar RNA SNORD86 Neighboring gene group XIIA secretory phospholipase A2-like Neighboring gene WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 Neighboring gene small nucleolar RNA SNORA43

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC134447

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001077075.3NP_001070543.2  protein Tob1

    See identical proteins and their annotated locations for NP_001070543.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    BT030578, EV745837, NKLS02000019
    UniProtKB/TrEMBL
    A5D9F9, Q2T9R4
    Related
    ENSBTAP00000078143.1, ENSBTAT00000107730.1
    Conserved Domains (1) summary
    smart00099
    Location:1106
    btg1; tob/btg1 family
  2. NM_001278574.1NP_001265503.1  protein Tob1

    See identical proteins and their annotated locations for NP_001265503.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    BT030578, DV840693, EV745837, NKLS02000019
    UniProtKB/TrEMBL
    A5D9F9, Q2T9R4
    Related
    ENSBTAP00000000714.4, ENSBTAT00000000714.6
    Conserved Domains (1) summary
    smart00099
    Location:1106
    btg1; tob/btg1 family

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    35883032..35886943
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)