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ZNF668 zinc finger protein 668 [ Bos taurus (domestic cattle) ]

Gene ID: 767831, updated on 4-Oct-2024

Summary

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Official Symbol
ZNF668provided by VGNC
Official Full Name
zinc finger protein 668provided by VGNC
Primary source
VGNC:VGNC:37326
See related
Ensembl:ENSBTAG00000006650
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ZNF668 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (27175024..27184380, complement)

Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene syntaxin 1B Neighboring gene uncharacterized LOC132343899 Neighboring gene syntaxin 4 Neighboring gene zinc finger protein 646 Neighboring gene serine protease 53 Neighboring gene vitamin K epoxide reductase complex subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC134102

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 668

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076953.1 → NP_001070421.1  zinc finger protein 668

    See identical proteins and their annotated locations for NP_001070421.1

    Status: PROVISIONAL

    Source sequence(s)
    BC111165
    UniProtKB/TrEMBL
    A0AAA9TRN0
    Related
    ENSBTAP00000008736.3, ENSBTAT00000008736.4
    Conserved Domains (4) summary
    COG5048
    Location:1 → 410
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:226 → 246
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:168 → 190
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:210 → 235
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    27175024..27184380 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024985061.2 → XP_024840829.1  zinc finger protein 668 isoform X1

    UniProtKB/Swiss-Prot
    Q1JPF5, Q2TA17
    UniProtKB/TrEMBL
    A0AAA9TRN0
    Conserved Domains (2) summary
    COG5048
    Location:80 → 414
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:226 → 246
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_024985062.2 → XP_024840830.1  zinc finger protein 668 isoform X1

    UniProtKB/Swiss-Prot
    Q1JPF5, Q2TA17
    UniProtKB/TrEMBL
    A0AAA9TRN0
    Conserved Domains (2) summary
    COG5048
    Location:80 → 414
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:226 → 246
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2TA17.2 GenPept UniProtKB/Swiss-Prot:Q2TA17

Gene LinkOut

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